P2S_model_fits.RdThe passage to spawner model, documented in vignette("passage_to_spawner_submodel", package = "SRJPEmodel"),
estimates the relationship between upstream passage counts and spawner counts (either redd or holding) for
several streams. When fit, the model produces an object P2S_model_fits that contains the parameter names,
mean parameter estimate, confidence intervals, and diagnostics. Currently, this model is only fit for
battle creek, clear creek, deer creek, and mill creek.
P2S_model_fitsA tibble with 343 rows and 12 columns
par_names: Parameter name
mean: Mean of the posterior distribution for a parameter
se_mean: Monte Carlo standard error for summary of all chains merged. See details
sd: Standard deviation of the posterior distribution for a parameter
2.5%: 2.5% quantile of posterior distribution for a parameter
25%: 25% quantile of posterior distribution for a parameter
50%: 50% quantile of posterior distribution for a parameter
75%: 75% quantile of posterior distribution for a parameter
97.5%: 97.5% quantile of posterior distribution for a parameter
n_eff: Effective sample size for a parameter
Rhat: Split Rhats for a parameter
stream: Stream name for the parameter estimate
year_index: Identifier for a parameter estimate (1:n, where n is the total number of years modeled) that allows us to join the observed year back to the data table
year: Year associated with the parameter estimates and observed data